Cluster: HRGMv2_2630_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2630
- CGC Family ID: CGCFAM_06144
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2630_7 | HRGMv2_2630_7_2 | 922 | 2553 | + | 3.A.1.5.35 |
| TC | HRGMv2_2630_7 | HRGMv2_2630_7_3 | 2602 | 3528 | + | 3.A.1.5.35 |
| TC | HRGMv2_2630_7 | HRGMv2_2630_7_4 | 3521 | 4615 | + | 3.A.1.5.35 |
| TC | HRGMv2_2630_7 | HRGMv2_2630_7_5 | 4612 | 6405 | + | 3.A.1.5.23 |
| TC | HRGMv2_2630_7 | HRGMv2_2630_7_6 | 6445 | 9063 | - | 3.A.1.125.3 |
| TC | HRGMv2_2630_7 | HRGMv2_2630_7_7 | 9060 | 9827 | - | 3.A.1.125.3 |
| CAZyme | HRGMv2_2630_7 | HRGMv2_2630_7_8 | 9836 | 12106 | - | GT89 |
Gene ID: HRGMv2_2630_7_2
Type: TC
Location: 922 - 2553 (+)
Type: TC
Location: 922 - 2553 (+)
Gene ID: HRGMv2_2630_7_3
Type: TC
Location: 2602 - 3528 (+)
Type: TC
Location: 2602 - 3528 (+)
Gene ID: HRGMv2_2630_7_4
Type: TC
Location: 3521 - 4615 (+)
Type: TC
Location: 3521 - 4615 (+)
Gene ID: HRGMv2_2630_7_5
Type: TC
Location: 4612 - 6405 (+)
Type: TC
Location: 4612 - 6405 (+)
Gene ID: HRGMv2_2630_7_6
Type: TC
Location: 6445 - 9063 (-)
Type: TC
Location: 6445 - 9063 (-)
Gene ID: HRGMv2_2630_7_7
Type: TC
Location: 9060 - 9827 (-)
Type: TC
Location: 9060 - 9827 (-)
Gene ID: HRGMv2_2630_7_8
Type: CAZyme
Location: 9836 - 12106 (-)
Type: CAZyme
Location: 9836 - 12106 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.