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Cluster: HRGMv2_2630_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2630_1 HRGMv2_2630_1_156 171054 173489 + 3.A.3.5.31
pfam HRGMv2_2630_1 HRGMv2_2630_1_157 173486 173839 + Trns_repr_metal
pfam HRGMv2_2630_1 HRGMv2_2630_1_158 173879 175336 - Dyp_perox_N | Dyp_perox_C
TC HRGMv2_2630_1 HRGMv2_2630_1_159 175439 176779 - 2.A.108.2.3
TC HRGMv2_2630_1 HRGMv2_2630_1_160 176831 177730 - 2.A.108.2.3
CAZyme HRGMv2_2630_1 HRGMv2_2630_1_161 177832 178809 - GT2
TC HRGMv2_2630_1 HRGMv2_2630_1_162 178880 179746 - 3.A.1.103.4
Gene ID: HRGMv2_2630_1_156
Type: TC
Location: 171054 - 173489 (+)
Gene ID: HRGMv2_2630_1_157
Type: pfam
Location: 173486 - 173839 (+)
Gene ID: HRGMv2_2630_1_158
Type: pfam
Location: 173879 - 175336 (-)
Gene ID: HRGMv2_2630_1_159
Type: TC
Location: 175439 - 176779 (-)
Gene ID: HRGMv2_2630_1_160
Type: TC
Location: 176831 - 177730 (-)
Gene ID: HRGMv2_2630_1_161
Type: CAZyme
Location: 177832 - 178809 (-)
Gene ID: HRGMv2_2630_1_162
Type: TC
Location: 178880 - 179746 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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