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Cluster: HRGMv2_2629_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2629_6 HRGMv2_2629_6_61 60118 60657 + 9.B.148.3.1
pfam HRGMv2_2629_6 HRGMv2_2629_6_62 60811 62799 + DUF6779
pfam HRGMv2_2629_6 HRGMv2_2629_6_63 62800 63645 + Pantoate_ligase
CAZyme HRGMv2_2629_6 HRGMv2_2629_6_64 63651 64736 + CE1
TC HRGMv2_2629_6 HRGMv2_2629_6_65 64901 66403 - 2.A.1.4.3
pfam HRGMv2_2629_6 HRGMv2_2629_6_66 66549 68195 + tRNA-synt_2 | tRNA_anti-codon
STP HRGMv2_2629_6 HRGMv2_2629_6_67 68250 70520 - Pyr_redox_2
TC HRGMv2_2629_6 HRGMv2_2629_6_68 70766 73456 + 3.A.9.1.2
Gene ID: HRGMv2_2629_6_61
Type: TC
Location: 60118 - 60657 (+)
Gene ID: HRGMv2_2629_6_62
Type: pfam
Location: 60811 - 62799 (+)
Gene ID: HRGMv2_2629_6_63
Type: pfam
Location: 62800 - 63645 (+)
Gene ID: HRGMv2_2629_6_64
Type: CAZyme
Location: 63651 - 64736 (+)
Gene ID: HRGMv2_2629_6_65
Type: TC
Location: 64901 - 66403 (-)
Gene ID: HRGMv2_2629_6_66
Type: pfam
Location: 66549 - 68195 (+)
Gene ID: HRGMv2_2629_6_67
Type: STP
Location: 68250 - 70520 (-)
Gene ID: HRGMv2_2629_6_68
Type: TC
Location: 70766 - 73456 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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