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Cluster: HRGMv2_2629_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2629_19 HRGMv2_2629_19_7 9400 10644 + GH76
pfam HRGMv2_2629_19 HRGMv2_2629_19_8 10838 12274 + LIP
pfam HRGMv2_2629_19 HRGMv2_2629_19_9 12439 13473 - F_bP_aldolase
TC HRGMv2_2629_19 HRGMv2_2629_19_10 13811 14707 + 9.B.27.2.3
pfam HRGMv2_2629_19 HRGMv2_2629_19_11 14700 15839 + FUSC_2
pfam HRGMv2_2629_19 HRGMv2_2629_19_12 15983 17326 + Adenylsucc_synt
TC HRGMv2_2629_19 HRGMv2_2629_19_13 17505 18932 - 2.A.25.1.5
TC HRGMv2_2629_19 HRGMv2_2629_19_14 18982 20454 + 2.A.25.1.5
CAZyme HRGMv2_2629_19 HRGMv2_2629_19_15 20658 23108 + GH31_17
pfam HRGMv2_2629_19 HRGMv2_2629_19_16 23164 24381 + ATP-grasp | CPSase_L_D2 | Dala_Dala_lig_C | PurT_C | RS_preATP-grasp-like
TC HRGMv2_2629_19 HRGMv2_2629_19_17 24702 25799 + 3.D.2.2.2
TC HRGMv2_2629_19 HRGMv2_2629_19_18 25803 26141 + 3.D.2.2.2
TC HRGMv2_2629_19 HRGMv2_2629_19_19 26141 27610 + 3.D.2.2.1
Gene ID: HRGMv2_2629_19_7
Type: CAZyme
Location: 9400 - 10644 (+)
Gene ID: HRGMv2_2629_19_8
Type: pfam
Location: 10838 - 12274 (+)
Gene ID: HRGMv2_2629_19_9
Type: pfam
Location: 12439 - 13473 (-)
Gene ID: HRGMv2_2629_19_10
Type: TC
Location: 13811 - 14707 (+)
Gene ID: HRGMv2_2629_19_11
Type: pfam
Location: 14700 - 15839 (+)
Gene ID: HRGMv2_2629_19_12
Type: pfam
Location: 15983 - 17326 (+)
Gene ID: HRGMv2_2629_19_13
Type: TC
Location: 17505 - 18932 (-)
Gene ID: HRGMv2_2629_19_14
Type: TC
Location: 18982 - 20454 (+)
Gene ID: HRGMv2_2629_19_15
Type: CAZyme
Location: 20658 - 23108 (+)
Gene ID: HRGMv2_2629_19_16
Type: pfam
Location: 23164 - 24381 (+)
Gene ID: HRGMv2_2629_19_17
Type: TC
Location: 24702 - 25799 (+)
Gene ID: HRGMv2_2629_19_18
Type: TC
Location: 25803 - 26141 (+)
Gene ID: HRGMv2_2629_19_19
Type: TC
Location: 26141 - 27610 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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