Cluster: HRGMv2_2629_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2629
- CGC Family ID: CGCFAM_03974
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2629_9 | HRGMv2_2629_9_12 | 14878 | 16365 | - | 2.A.21.2.4 |
| sulfatase | HRGMv2_2629_9 | HRGMv2_2629_9_13 | 16678 | 18588 | + | S1_97 |
| STP | HRGMv2_2629_9 | HRGMv2_2629_9_14 | 18603 | 20615 | + | SBP_bac_5 |
| CAZyme | HRGMv2_2629_9 | HRGMv2_2629_9_15 | 20615 | 21739 | + | CE14 |
| STP | HRGMv2_2629_9 | HRGMv2_2629_9_16 | 21773 | 22099 | + | Fer4 |
| STP | HRGMv2_2629_9 | HRGMv2_2629_9_17 | 22105 | 23235 | + | Aminotran_1_2 |
| TC | HRGMv2_2629_9 | HRGMv2_2629_9_18 | 23427 | 24908 | - | 2.A.3.1.12 |
Gene ID: HRGMv2_2629_9_12
Type: TC
Location: 14878 - 16365 (-)
Type: TC
Location: 14878 - 16365 (-)
Gene ID: HRGMv2_2629_9_13
Type: sulfatase
Location: 16678 - 18588 (+)
Type: sulfatase
Location: 16678 - 18588 (+)
Gene ID: HRGMv2_2629_9_14
Type: STP
Location: 18603 - 20615 (+)
Type: STP
Location: 18603 - 20615 (+)
Gene ID: HRGMv2_2629_9_15
Type: CAZyme
Location: 20615 - 21739 (+)
Type: CAZyme
Location: 20615 - 21739 (+)
Gene ID: HRGMv2_2629_9_16
Type: STP
Location: 21773 - 22099 (+)
Type: STP
Location: 21773 - 22099 (+)
Gene ID: HRGMv2_2629_9_17
Type: STP
Location: 22105 - 23235 (+)
Type: STP
Location: 22105 - 23235 (+)
Gene ID: HRGMv2_2629_9_18
Type: TC
Location: 23427 - 24908 (-)
Type: TC
Location: 23427 - 24908 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Lawsonella
Species
Lawsonella clevelandensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.