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Cluster: HRGMv2_2629_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2629_8 HRGMv2_2629_8_47 78894 79919 + CE1
CAZyme HRGMv2_2629_8 HRGMv2_2629_8_48 80161 81921 + CE1
pfam HRGMv2_2629_8 HRGMv2_2629_8_49 81932 82414 + DUF732
CAZyme HRGMv2_2629_8 HRGMv2_2629_8_50 82463 83398 + CE5
TC HRGMv2_2629_8 HRGMv2_2629_8_51 83554 85101 + 3.B.1.1.2
CAZyme HRGMv2_2629_8 HRGMv2_2629_8_52 85098 88574 - GT53
Gene ID: HRGMv2_2629_8_47
Type: CAZyme
Location: 78894 - 79919 (+)
Gene ID: HRGMv2_2629_8_48
Type: CAZyme
Location: 80161 - 81921 (+)
Gene ID: HRGMv2_2629_8_49
Type: pfam
Location: 81932 - 82414 (+)
Gene ID: HRGMv2_2629_8_50
Type: CAZyme
Location: 82463 - 83398 (+)
Gene ID: HRGMv2_2629_8_51
Type: TC
Location: 83554 - 85101 (+)
Gene ID: HRGMv2_2629_8_52
Type: CAZyme
Location: 85098 - 88574 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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