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Cluster: HRGMv2_2629_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2629_6 HRGMv2_2629_6_78 83114 83959 - 3.A.1.15.6
TC HRGMv2_2629_6 HRGMv2_2629_6_79 83952 84770 - 3.A.1.15.8
pfam HRGMv2_2629_6 HRGMv2_2629_6_80 84818 85861 - ZnuA
TF HRGMv2_2629_6 HRGMv2_2629_6_81 86191 87270 + LacI
TC HRGMv2_2629_6 HRGMv2_2629_6_82 87361 89967 - 2.A.1.3.19
NULL(UNKNOWN) HRGMv2_2629_6 HRGMv2_2629_6_83 90056 90841 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2629_6 HRGMv2_2629_6_84 90976 91677 - HTH_5
CAZyme HRGMv2_2629_6 HRGMv2_2629_6_85 91681 93225 - GT20
Gene ID: HRGMv2_2629_6_78
Type: TC
Location: 83114 - 83959 (-)
Gene ID: HRGMv2_2629_6_79
Type: TC
Location: 83952 - 84770 (-)
Gene ID: HRGMv2_2629_6_80
Type: pfam
Location: 84818 - 85861 (-)
Gene ID: HRGMv2_2629_6_81
Type: TF
Location: 86191 - 87270 (+)
Gene ID: HRGMv2_2629_6_82
Type: TC
Location: 87361 - 89967 (-)
Gene ID: HRGMv2_2629_6_83
Type:
Location: 90056 - 90841 (-)
Gene ID: HRGMv2_2629_6_84
Type: TF
Location: 90976 - 91677 (-)
Gene ID: HRGMv2_2629_6_85
Type: CAZyme
Location: 91681 - 93225 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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