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Cluster: HRGMv2_2628_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2628_1 HRGMv2_2628_1_274 306399 307946 - 3.B.1.1.2
CAZyme HRGMv2_2628_1 HRGMv2_2628_1_275 308088 309023 - CE5
pfam HRGMv2_2628_1 HRGMv2_2628_1_276 309072 309554 - DUF732
CAZyme HRGMv2_2628_1 HRGMv2_2628_1_277 309565 311319 - CE1
CAZyme HRGMv2_2628_1 HRGMv2_2628_1_278 311561 312586 - CE1
pfam HRGMv2_2628_1 HRGMv2_2628_1_279 312923 313951 - UbiA
pfam HRGMv2_2628_1 HRGMv2_2628_1_280 314027 319036 - ketoacyl-synt | PP-binding | PP-binding | Acyl_transf_1 | Thioesterase | Ketoacyl-synt_C | KAsynt_C_assoc | ACP_SdgA_C
TC HRGMv2_2628_1 HRGMv2_2628_1_281 319477 321390 - 4.C.1.1.4
NULL(UNKNOWN) HRGMv2_2628_1 HRGMv2_2628_1_282 321609 322595 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2628_1 HRGMv2_2628_1_283 322628 323452 - PAP2
CAZyme HRGMv2_2628_1 HRGMv2_2628_1_284 323598 325736 - GT2
Gene ID: HRGMv2_2628_1_274
Type: TC
Location: 306399 - 307946 (-)
Gene ID: HRGMv2_2628_1_275
Type: CAZyme
Location: 308088 - 309023 (-)
Gene ID: HRGMv2_2628_1_276
Type: pfam
Location: 309072 - 309554 (-)
Gene ID: HRGMv2_2628_1_277
Type: CAZyme
Location: 309565 - 311319 (-)
Gene ID: HRGMv2_2628_1_278
Type: CAZyme
Location: 311561 - 312586 (-)
Gene ID: HRGMv2_2628_1_279
Type: pfam
Location: 312923 - 313951 (-)
Gene ID: HRGMv2_2628_1_280
Type: pfam
Location: 314027 - 319036 (-)
Gene ID: HRGMv2_2628_1_281
Type: TC
Location: 319477 - 321390 (-)
Gene ID: HRGMv2_2628_1_282
Type:
Location: 321609 - 322595 (-)
Gene ID: HRGMv2_2628_1_283
Type: pfam
Location: 322628 - 323452 (-)
Gene ID: HRGMv2_2628_1_284
Type: CAZyme
Location: 323598 - 325736 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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