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Cluster: HRGMv2_2628_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2628_1 HRGMv2_2628_1_657 801732 802577 - 3.A.1.15.6
TC HRGMv2_2628_1 HRGMv2_2628_1_658 802570 803388 - 3.A.1.15.8
pfam HRGMv2_2628_1 HRGMv2_2628_1_659 803442 804485 - ZnuA
TF HRGMv2_2628_1 HRGMv2_2628_1_660 804816 805895 + LacI
TC HRGMv2_2628_1 HRGMv2_2628_1_661 805991 808597 - 2.A.1.3.19
NULL(UNKNOWN) HRGMv2_2628_1 HRGMv2_2628_1_662 808686 809471 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2628_1 HRGMv2_2628_1_663 809606 810307 - HTH_5
CAZyme HRGMv2_2628_1 HRGMv2_2628_1_664 810311 811855 - GT20
Gene ID: HRGMv2_2628_1_657
Type: TC
Location: 801732 - 802577 (-)
Gene ID: HRGMv2_2628_1_658
Type: TC
Location: 802570 - 803388 (-)
Gene ID: HRGMv2_2628_1_659
Type: pfam
Location: 803442 - 804485 (-)
Gene ID: HRGMv2_2628_1_660
Type: TF
Location: 804816 - 805895 (+)
Gene ID: HRGMv2_2628_1_661
Type: TC
Location: 805991 - 808597 (-)
Gene ID: HRGMv2_2628_1_662
Type:
Location: 808686 - 809471 (-)
Gene ID: HRGMv2_2628_1_663
Type: TF
Location: 809606 - 810307 (-)
Gene ID: HRGMv2_2628_1_664
Type: CAZyme
Location: 810311 - 811855 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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