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Cluster: HRGMv2_2628_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2628_1 HRGMv2_2628_1_561 691788 692684 + 9.B.27.2.3
pfam HRGMv2_2628_1 HRGMv2_2628_1_562 692677 693816 + FUSC_2
pfam HRGMv2_2628_1 HRGMv2_2628_1_563 693961 695304 + Adenylsucc_synt
TC HRGMv2_2628_1 HRGMv2_2628_1_564 695415 696842 - 2.A.25.1.5
TC HRGMv2_2628_1 HRGMv2_2628_1_565 696892 698364 + 2.A.25.1.5
CAZyme HRGMv2_2628_1 HRGMv2_2628_1_566 698566 701016 + GH31_17
pfam HRGMv2_2628_1 HRGMv2_2628_1_567 701072 702289 + ATP-grasp | CPSase_L_D2 | Dala_Dala_lig_C | PurT_C | RS_preATP-grasp-like
TC HRGMv2_2628_1 HRGMv2_2628_1_568 702611 703708 + 3.D.2.2.2
TC HRGMv2_2628_1 HRGMv2_2628_1_569 703712 704050 + 3.D.2.2.2
TC HRGMv2_2628_1 HRGMv2_2628_1_570 704050 705519 + 3.D.2.2.1
Gene ID: HRGMv2_2628_1_561
Type: TC
Location: 691788 - 692684 (+)
Gene ID: HRGMv2_2628_1_562
Type: pfam
Location: 692677 - 693816 (+)
Gene ID: HRGMv2_2628_1_563
Type: pfam
Location: 693961 - 695304 (+)
Gene ID: HRGMv2_2628_1_564
Type: TC
Location: 695415 - 696842 (-)
Gene ID: HRGMv2_2628_1_565
Type: TC
Location: 696892 - 698364 (+)
Gene ID: HRGMv2_2628_1_566
Type: CAZyme
Location: 698566 - 701016 (+)
Gene ID: HRGMv2_2628_1_567
Type: pfam
Location: 701072 - 702289 (+)
Gene ID: HRGMv2_2628_1_568
Type: TC
Location: 702611 - 703708 (+)
Gene ID: HRGMv2_2628_1_569
Type: TC
Location: 703712 - 704050 (+)
Gene ID: HRGMv2_2628_1_570
Type: TC
Location: 704050 - 705519 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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