Cluster: HRGMv2_2627_CGC9
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2627
- CGC Family ID: CGCFAM_04060
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2627_8 | HRGMv2_2627_8_33 | 34665 | 36197 | - | 3.B.1.1.2 |
| TC | HRGMv2_2627_8 | HRGMv2_2627_8_34 | 36224 | 37801 | - | 3.B.1.1.2 |
| NULL(UNKNOWN) | HRGMv2_2627_8 | HRGMv2_2627_8_35 | 38095 | 38346 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2627_8 | HRGMv2_2627_8_36 | 38522 | 38824 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2627_8 | HRGMv2_2627_8_37 | 38834 | 40264 | - | 2.A.20.1.3 |
| CAZyme | HRGMv2_2627_8 | HRGMv2_2627_8_38 | 40452 | 41981 | - | GH13_16 |
| NULL(UNKNOWN) | HRGMv2_2627_8 | HRGMv2_2627_8_39 | 41978 | 42163 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2627_8 | HRGMv2_2627_8_40 | 42163 | 42531 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2627_8 | HRGMv2_2627_8_41 | 42531 | 43352 | - | 3.A.1.1.31 |
| TC | HRGMv2_2627_8 | HRGMv2_2627_8_42 | 43352 | 44332 | - | 3.A.1.1.19 |
| TC | HRGMv2_2627_8 | HRGMv2_2627_8_43 | 44498 | 45787 | - | 3.A.1.1.41 |
| TC | HRGMv2_2627_8 | HRGMv2_2627_8_44 | 45949 | 46941 | - | 3.A.1.1.23 |
Gene ID: HRGMv2_2627_8_33
Type: TC
Location: 34665 - 36197 (-)
Type: TC
Location: 34665 - 36197 (-)
Gene ID: HRGMv2_2627_8_34
Type: TC
Location: 36224 - 37801 (-)
Type: TC
Location: 36224 - 37801 (-)
Gene ID: HRGMv2_2627_8_35
Type:
Location: 38095 - 38346 (-)
Type:
Location: 38095 - 38346 (-)
Gene ID: HRGMv2_2627_8_36
Type:
Location: 38522 - 38824 (-)
Type:
Location: 38522 - 38824 (-)
Gene ID: HRGMv2_2627_8_37
Type: TC
Location: 38834 - 40264 (-)
Type: TC
Location: 38834 - 40264 (-)
Gene ID: HRGMv2_2627_8_38
Type: CAZyme
Location: 40452 - 41981 (-)
Type: CAZyme
Location: 40452 - 41981 (-)
Gene ID: HRGMv2_2627_8_39
Type:
Location: 41978 - 42163 (-)
Type:
Location: 41978 - 42163 (-)
Gene ID: HRGMv2_2627_8_40
Type:
Location: 42163 - 42531 (-)
Type:
Location: 42163 - 42531 (-)
Gene ID: HRGMv2_2627_8_41
Type: TC
Location: 42531 - 43352 (-)
Type: TC
Location: 42531 - 43352 (-)
Gene ID: HRGMv2_2627_8_42
Type: TC
Location: 43352 - 44332 (-)
Type: TC
Location: 43352 - 44332 (-)
Gene ID: HRGMv2_2627_8_43
Type: TC
Location: 44498 - 45787 (-)
Type: TC
Location: 44498 - 45787 (-)
Gene ID: HRGMv2_2627_8_44
Type: TC
Location: 45949 - 46941 (-)
Type: TC
Location: 45949 - 46941 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium striatum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.