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Cluster: HRGMv2_2627_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2627_38 HRGMv2_2627_38_3 1881 2507 + 3.A.1.31.2
TC HRGMv2_2627_38 HRGMv2_2627_38_4 2507 3253 + 3.A.1.31.2
TC HRGMv2_2627_38 HRGMv2_2627_38_5 3250 4728 + 3.A.1.31.2
TC HRGMv2_2627_38 HRGMv2_2627_38_6 4732 6456 - 3.A.1.21.2
TC HRGMv2_2627_38 HRGMv2_2627_38_7 6456 8222 - 3.A.1.21.2
peptidase HRGMv2_2627_38 HRGMv2_2627_38_8 8250 9035 - S33.UPW
CAZyme HRGMv2_2627_38 HRGMv2_2627_38_9 9032 10249 - GT1
pfam HRGMv2_2627_38 HRGMv2_2627_38_10 10257 10886 - Hexapep | Mac | Hexapep_2
TC HRGMv2_2627_38 HRGMv2_2627_38_11 11298 12362 + 3.A.1.105.1
Gene ID: HRGMv2_2627_38_3
Type: TC
Location: 1881 - 2507 (+)
Gene ID: HRGMv2_2627_38_4
Type: TC
Location: 2507 - 3253 (+)
Gene ID: HRGMv2_2627_38_5
Type: TC
Location: 3250 - 4728 (+)
Gene ID: HRGMv2_2627_38_6
Type: TC
Location: 4732 - 6456 (-)
Gene ID: HRGMv2_2627_38_7
Type: TC
Location: 6456 - 8222 (-)
Gene ID: HRGMv2_2627_38_8
Type: peptidase
Location: 8250 - 9035 (-)
Gene ID: HRGMv2_2627_38_9
Type: CAZyme
Location: 9032 - 10249 (-)
Gene ID: HRGMv2_2627_38_10
Type: pfam
Location: 10257 - 10886 (-)
Gene ID: HRGMv2_2627_38_11
Type: TC
Location: 11298 - 12362 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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