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Cluster: HRGMv2_2627_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2627_19 HRGMv2_2627_19_24 28389 29936 - 3.B.1.1.5
pfam HRGMv2_2627_19 HRGMv2_2627_19_25 29936 34687 - ketoacyl-synt | PP-binding | PP-binding | Acyl_transf_1 | Thioesterase | Ketoacyl-synt_C | Abhydrolase_6 | KAsynt_C_assoc | ACP_SdgA_C
sulfatase HRGMv2_2627_19 HRGMv2_2627_19_26 34884 36734 - S1_4
CAZyme HRGMv2_2627_19 HRGMv2_2627_19_27 36822 37751 - CE5
pfam HRGMv2_2627_19 HRGMv2_2627_19_28 37767 38276 - DUF732
CAZyme HRGMv2_2627_19 HRGMv2_2627_19_29 38279 40246 - CE1
CAZyme HRGMv2_2627_19 HRGMv2_2627_19_30 40475 41497 - CE1
CAZyme HRGMv2_2627_19 HRGMv2_2627_19_31 41723 43471 - GT89
pfam HRGMv2_2627_19 HRGMv2_2627_19_32 43529 44524 - UbiA
pfam HRGMv2_2627_19 HRGMv2_2627_19_33 44521 45048 - PAP2 | PAP2_3
CAZyme HRGMv2_2627_19 HRGMv2_2627_19_34 45038 47128 - GT2
Gene ID: HRGMv2_2627_19_24
Type: TC
Location: 28389 - 29936 (-)
Gene ID: HRGMv2_2627_19_25
Type: pfam
Location: 29936 - 34687 (-)
Gene ID: HRGMv2_2627_19_26
Type: sulfatase
Location: 34884 - 36734 (-)
Gene ID: HRGMv2_2627_19_27
Type: CAZyme
Location: 36822 - 37751 (-)
Gene ID: HRGMv2_2627_19_28
Type: pfam
Location: 37767 - 38276 (-)
Gene ID: HRGMv2_2627_19_29
Type: CAZyme
Location: 38279 - 40246 (-)
Gene ID: HRGMv2_2627_19_30
Type: CAZyme
Location: 40475 - 41497 (-)
Gene ID: HRGMv2_2627_19_31
Type: CAZyme
Location: 41723 - 43471 (-)
Gene ID: HRGMv2_2627_19_32
Type: pfam
Location: 43529 - 44524 (-)
Gene ID: HRGMv2_2627_19_33
Type: pfam
Location: 44521 - 45048 (-)
Gene ID: HRGMv2_2627_19_34
Type: CAZyme
Location: 45038 - 47128 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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