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Cluster: HRGMv2_2627_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2627_10 HRGMv2_2627_10_68 63032 63610 - 3.A.1.124.1
TF HRGMv2_2627_10 HRGMv2_2627_10_69 63782 64438 - GerE
pfam HRGMv2_2627_10 HRGMv2_2627_10_70 64438 65571 - HisKA_3
CAZyme HRGMv2_2627_10 HRGMv2_2627_10_71 65592 66863 - GT4
TC HRGMv2_2627_10 HRGMv2_2627_10_72 66938 68656 + 4.C.1.1.4
pfam HRGMv2_2627_10 HRGMv2_2627_10_73 68990 69361 + DoxX_2
TC HRGMv2_2627_10 HRGMv2_2627_10_74 69998 71731 + 4.C.1.1.4
TC HRGMv2_2627_10 HRGMv2_2627_10_75 71981 73795 + 4.C.1.1.4
Gene ID: HRGMv2_2627_10_68
Type: TC
Location: 63032 - 63610 (-)
Gene ID: HRGMv2_2627_10_69
Type: TF
Location: 63782 - 64438 (-)
Gene ID: HRGMv2_2627_10_70
Type: pfam
Location: 64438 - 65571 (-)
Gene ID: HRGMv2_2627_10_71
Type: CAZyme
Location: 65592 - 66863 (-)
Gene ID: HRGMv2_2627_10_72
Type: TC
Location: 66938 - 68656 (+)
Gene ID: HRGMv2_2627_10_73
Type: pfam
Location: 68990 - 69361 (+)
Gene ID: HRGMv2_2627_10_74
Type: TC
Location: 69998 - 71731 (+)
Gene ID: HRGMv2_2627_10_75
Type: TC
Location: 71981 - 73795 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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