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Cluster: HRGMv2_2623_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2623_1 HRGMv2_2623_1_194 273957 274361 - 3.A.2.1.5
TC HRGMv2_2623_1 HRGMv2_2623_1_195 274365 275780 - 3.A.2.1.5
TC HRGMv2_2623_1 HRGMv2_2623_1_196 275806 276678 - 3.A.2.1.5
TC HRGMv2_2623_1 HRGMv2_2623_1_197 276685 278187 - 3.A.2.1.5
pfam HRGMv2_2623_1 HRGMv2_2623_1_198 278194 278694 - OSCP
pfam HRGMv2_2623_1 HRGMv2_2623_1_199 278691 279176 - ATP-synt_B
TC HRGMv2_2623_1 HRGMv2_2623_1_200 279249 279473 - 3.A.2.1.5
TC HRGMv2_2623_1 HRGMv2_2623_1_201 279537 280220 - 3.A.2.1.2
CAZyme HRGMv2_2623_1 HRGMv2_2623_1_202 280500 282182 - GH26
Gene ID: HRGMv2_2623_1_194
Type: TC
Location: 273957 - 274361 (-)
Gene ID: HRGMv2_2623_1_195
Type: TC
Location: 274365 - 275780 (-)
Gene ID: HRGMv2_2623_1_196
Type: TC
Location: 275806 - 276678 (-)
Gene ID: HRGMv2_2623_1_197
Type: TC
Location: 276685 - 278187 (-)
Gene ID: HRGMv2_2623_1_198
Type: pfam
Location: 278194 - 278694 (-)
Gene ID: HRGMv2_2623_1_199
Type: pfam
Location: 278691 - 279176 (-)
Gene ID: HRGMv2_2623_1_200
Type: TC
Location: 279249 - 279473 (-)
Gene ID: HRGMv2_2623_1_201
Type: TC
Location: 279537 - 280220 (-)
Gene ID: HRGMv2_2623_1_202
Type: CAZyme
Location: 280500 - 282182 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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