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Cluster: HRGMv2_2623_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2623_1 HRGMv2_2623_1_67 122343 123980 + GH106
TF HRGMv2_2623_1 HRGMv2_2623_1_68 124082 124891 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2623_1 HRGMv2_2623_1_69 125040 126434 + GH4
CAZyme HRGMv2_2623_1 HRGMv2_2623_1_70 126635 128539 + GH36
TF HRGMv2_2623_1 HRGMv2_2623_1_71 128575 129417 - HTH_AraC
CAZyme HRGMv2_2623_1 HRGMv2_2623_1_72 129529 132618 + GH106
TC HRGMv2_2623_1 HRGMv2_2623_1_73 132754 133746 + 8.A.5.1.3
Gene ID: HRGMv2_2623_1_67
Type: CAZyme
Location: 122343 - 123980 (+)
Gene ID: HRGMv2_2623_1_68
Type: TF
Location: 124082 - 124891 (-)
Gene ID: HRGMv2_2623_1_69
Type: CAZyme
Location: 125040 - 126434 (+)
Gene ID: HRGMv2_2623_1_70
Type: CAZyme
Location: 126635 - 128539 (+)
Gene ID: HRGMv2_2623_1_71
Type: TF
Location: 128575 - 129417 (-)
Gene ID: HRGMv2_2623_1_72
Type: CAZyme
Location: 129529 - 132618 (+)
Gene ID: HRGMv2_2623_1_73
Type: TC
Location: 132754 - 133746 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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