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Cluster: HRGMv2_2623_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2623_21 HRGMv2_2623_21_21 17146 18165 + 2.A.120.1.7
pfam HRGMv2_2623_21 HRGMv2_2623_21_22 18380 21187 + SLH | SLH | SLH | Flg_new
pfam HRGMv2_2623_21 HRGMv2_2623_21_23 21323 21655 - Cupin_2
TC HRGMv2_2623_21 HRGMv2_2623_21_24 21885 23078 + 9.B.34.1.3
CAZyme HRGMv2_2623_21 HRGMv2_2623_21_25 23173 24735 + CBM50
Gene ID: HRGMv2_2623_21_21
Type: TC
Location: 17146 - 18165 (+)
Gene ID: HRGMv2_2623_21_22
Type: pfam
Location: 18380 - 21187 (+)
Gene ID: HRGMv2_2623_21_23
Type: pfam
Location: 21323 - 21655 (-)
Gene ID: HRGMv2_2623_21_24
Type: TC
Location: 21885 - 23078 (+)
Gene ID: HRGMv2_2623_21_25
Type: CAZyme
Location: 23173 - 24735 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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