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Cluster: HRGMv2_2623_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2623_16 HRGMv2_2623_16_28 25734 26432 - 3.A.1.4.10
TC HRGMv2_2623_16 HRGMv2_2623_16_29 26419 27264 - 3.A.1.4.10
TC HRGMv2_2623_16 HRGMv2_2623_16_30 27266 28351 - 3.A.1.4.8
TC HRGMv2_2623_16 HRGMv2_2623_16_31 28361 29242 - 3.A.1.4.10
TC HRGMv2_2623_16 HRGMv2_2623_16_32 29423 30637 - 3.A.1.4.10
CAZyme HRGMv2_2623_16 HRGMv2_2623_16_33 31087 33369 - GT51
NULL(UNKNOWN) HRGMv2_2623_16 HRGMv2_2623_16_34 33555 33938 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2623_16 HRGMv2_2623_16_35 33959 34903 - Cation_efflux | ZT_dimer
TC HRGMv2_2623_16 HRGMv2_2623_16_36 34939 36045 - 2.A.103.1.3
Gene ID: HRGMv2_2623_16_28
Type: TC
Location: 25734 - 26432 (-)
Gene ID: HRGMv2_2623_16_29
Type: TC
Location: 26419 - 27264 (-)
Gene ID: HRGMv2_2623_16_30
Type: TC
Location: 27266 - 28351 (-)
Gene ID: HRGMv2_2623_16_31
Type: TC
Location: 28361 - 29242 (-)
Gene ID: HRGMv2_2623_16_32
Type: TC
Location: 29423 - 30637 (-)
Gene ID: HRGMv2_2623_16_33
Type: CAZyme
Location: 31087 - 33369 (-)
Gene ID: HRGMv2_2623_16_34
Type:
Location: 33555 - 33938 (+)
Gene ID: HRGMv2_2623_16_35
Type: pfam
Location: 33959 - 34903 (-)
Gene ID: HRGMv2_2623_16_36
Type: TC
Location: 34939 - 36045 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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