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Cluster: HRGMv2_2623_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2623_9 HRGMv2_2623_9_74 73318 74430 + GH88
TC HRGMv2_2623_9 HRGMv2_2623_9_75 74801 76159 - 2.A.66.1.33
peptidase HRGMv2_2623_9 HRGMv2_2623_9_76 76358 77266 + S33.UPW
TF HRGMv2_2623_9 HRGMv2_2623_9_77 77286 78110 - HTH_AraC
CAZyme HRGMv2_2623_9 HRGMv2_2623_9_78 78291 81275 + GH38
pfam HRGMv2_2623_9 HRGMv2_2623_9_79 81638 85561 + Lyase_8_N
CAZyme HRGMv2_2623_9 HRGMv2_2623_9_80 85589 86530 + GH179
pfam HRGMv2_2623_9 HRGMv2_2623_9_81 86537 87406 + GFO_IDH_MocA
CAZyme HRGMv2_2623_9 HRGMv2_2623_9_82 87515 89350 + GH20
TC HRGMv2_2623_9 HRGMv2_2623_9_83 89548 91734 + 3.A.3.5.1
Gene ID: HRGMv2_2623_9_74
Type: CAZyme
Location: 73318 - 74430 (+)
Gene ID: HRGMv2_2623_9_75
Type: TC
Location: 74801 - 76159 (-)
Gene ID: HRGMv2_2623_9_76
Type: peptidase
Location: 76358 - 77266 (+)
Gene ID: HRGMv2_2623_9_77
Type: TF
Location: 77286 - 78110 (-)
Gene ID: HRGMv2_2623_9_78
Type: CAZyme
Location: 78291 - 81275 (+)
Gene ID: HRGMv2_2623_9_79
Type: pfam
Location: 81638 - 85561 (+)
Gene ID: HRGMv2_2623_9_80
Type: CAZyme
Location: 85589 - 86530 (+)
Gene ID: HRGMv2_2623_9_81
Type: pfam
Location: 86537 - 87406 (+)
Gene ID: HRGMv2_2623_9_82
Type: CAZyme
Location: 87515 - 89350 (+)
Gene ID: HRGMv2_2623_9_83
Type: TC
Location: 89548 - 91734 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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