Cluster: HRGMv2_2623_CGC16
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2623
- CGC Family ID: CGCFAM_10125
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2623_4 | HRGMv2_2623_4_58 | 62876 | 63835 | + | 3.A.1.1.34 |
| TC | HRGMv2_2623_4 | HRGMv2_2623_4_59 | 63850 | 64707 | + | 3.A.1.1.39 |
| pfam | HRGMv2_2623_4 | HRGMv2_2623_4_60 | 64769 | 68701 | + | SLH | BNR | Sortilin-Vps10 |
| NULL(UNKNOWN) | HRGMv2_2623_4 | HRGMv2_2623_4_61 | 68832 | 70841 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2623_4 | HRGMv2_2623_4_62 | 70884 | 78521 | + | CE12 |
| CAZyme | HRGMv2_2623_4 | HRGMv2_2623_4_63 | 78579 | 82886 | + | CE12 |
| NULL(UNKNOWN) | HRGMv2_2623_4 | HRGMv2_2623_4_64 | 83035 | 84528 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2623_4 | HRGMv2_2623_4_65 | 84556 | 90525 | + | CE12 |
| pfam | HRGMv2_2623_4 | HRGMv2_2623_4_66 | 90611 | 94552 | + | SLH | SLH | SLH | Big_5 | Big_5 | Big_5 | Big_5 |
| pfam | HRGMv2_2623_4 | HRGMv2_2623_4_67 | 94554 | 98078 | + | Big_5 |
| CAZyme | HRGMv2_2623_4 | HRGMv2_2623_4_68 | 98167 | 99372 | + | GH37 |
| CAZyme | HRGMv2_2623_4 | HRGMv2_2623_4_69 | 99423 | 101129 | + | GH31_14 |
Gene ID: HRGMv2_2623_4_58
Type: TC
Location: 62876 - 63835 (+)
Type: TC
Location: 62876 - 63835 (+)
Gene ID: HRGMv2_2623_4_59
Type: TC
Location: 63850 - 64707 (+)
Type: TC
Location: 63850 - 64707 (+)
Gene ID: HRGMv2_2623_4_60
Type: pfam
Location: 64769 - 68701 (+)
Type: pfam
Location: 64769 - 68701 (+)
Gene ID: HRGMv2_2623_4_61
Type:
Location: 68832 - 70841 (+)
Type:
Location: 68832 - 70841 (+)
Gene ID: HRGMv2_2623_4_62
Type: CAZyme
Location: 70884 - 78521 (+)
Type: CAZyme
Location: 70884 - 78521 (+)
Gene ID: HRGMv2_2623_4_63
Type: CAZyme
Location: 78579 - 82886 (+)
Type: CAZyme
Location: 78579 - 82886 (+)
Gene ID: HRGMv2_2623_4_64
Type:
Location: 83035 - 84528 (+)
Type:
Location: 83035 - 84528 (+)
Gene ID: HRGMv2_2623_4_65
Type: CAZyme
Location: 84556 - 90525 (+)
Type: CAZyme
Location: 84556 - 90525 (+)
Gene ID: HRGMv2_2623_4_66
Type: pfam
Location: 90611 - 94552 (+)
Type: pfam
Location: 90611 - 94552 (+)
Gene ID: HRGMv2_2623_4_67
Type: pfam
Location: 94554 - 98078 (+)
Type: pfam
Location: 94554 - 98078 (+)
Gene ID: HRGMv2_2623_4_68
Type: CAZyme
Location: 98167 - 99372 (+)
Type: CAZyme
Location: 98167 - 99372 (+)
Gene ID: HRGMv2_2623_4_69
Type: CAZyme
Location: 99423 - 101129 (+)
Type: CAZyme
Location: 99423 - 101129 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Ructibacterium
Species
Ructibacterium sp900550775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.