dbCAN Logo

Cluster: HRGMv2_2623_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2623_2 HRGMv2_2623_2_88 94211 95182 + CE7
STP HRGMv2_2623_2 HRGMv2_2623_2_89 95204 95707 + AsnC_trans_reg
STP HRGMv2_2623_2 HRGMv2_2623_2_90 95704 96876 + Aminotran_1_2
TC HRGMv2_2623_2 HRGMv2_2623_2_91 97015 97833 + 3.A.1.3.15
TC HRGMv2_2623_2 HRGMv2_2623_2_92 98016 98717 + 3.A.1.3.11
TC HRGMv2_2623_2 HRGMv2_2623_2_93 98704 99426 + 3.A.1.3.25
STP HRGMv2_2623_2 HRGMv2_2623_2_94 99803 101167 - PALP
TC HRGMv2_2623_2 HRGMv2_2623_2_95 101566 102999 + 2.A.38.1.1
TC HRGMv2_2623_2 HRGMv2_2623_2_96 103048 104490 + 2.A.38.1.1
TC HRGMv2_2623_2 HRGMv2_2623_2_97 104716 105492 + 8.A.3.2.1
Gene ID: HRGMv2_2623_2_88
Type: CAZyme
Location: 94211 - 95182 (+)
Gene ID: HRGMv2_2623_2_89
Type: STP
Location: 95204 - 95707 (+)
Gene ID: HRGMv2_2623_2_90
Type: STP
Location: 95704 - 96876 (+)
Gene ID: HRGMv2_2623_2_91
Type: TC
Location: 97015 - 97833 (+)
Gene ID: HRGMv2_2623_2_92
Type: TC
Location: 98016 - 98717 (+)
Gene ID: HRGMv2_2623_2_93
Type: TC
Location: 98704 - 99426 (+)
Gene ID: HRGMv2_2623_2_94
Type: STP
Location: 99803 - 101167 (-)
Gene ID: HRGMv2_2623_2_95
Type: TC
Location: 101566 - 102999 (+)
Gene ID: HRGMv2_2623_2_96
Type: TC
Location: 103048 - 104490 (+)
Gene ID: HRGMv2_2623_2_97
Type: TC
Location: 104716 - 105492 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2623_2_94 vegetarian > vegan 1.00427 0.01882

🧭 Explore Read Mapping of CGC

← Back to Cluster List