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Cluster: HRGMv2_2623_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2623_1 HRGMv2_2623_1_3 3171 4208 + GH105
TC HRGMv2_2623_1 HRGMv2_2623_1_4 4205 5155 + 3.A.1.1.10
TC HRGMv2_2623_1 HRGMv2_2623_1_5 5168 6046 + 3.A.1.1.29
TC HRGMv2_2623_1 HRGMv2_2623_1_6 6100 7725 + 3.A.1.1.9
Gene ID: HRGMv2_2623_1_3
Type: CAZyme
Location: 3171 - 4208 (+)
Gene ID: HRGMv2_2623_1_4
Type: TC
Location: 4205 - 5155 (+)
Gene ID: HRGMv2_2623_1_5
Type: TC
Location: 5168 - 6046 (+)
Gene ID: HRGMv2_2623_1_6
Type: TC
Location: 6100 - 7725 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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