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Cluster: HRGMv2_2622_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2622_5 HRGMv2_2622_5_55 74779 75840 - GT2
pfam HRGMv2_2622_5 HRGMv2_2622_5_56 75803 76387 - Hexapep | Hexapep_2 | Hexapep_2
pfam HRGMv2_2622_5 HRGMv2_2622_5_57 76508 77743 - SLH
CAZyme HRGMv2_2622_5 HRGMv2_2622_5_58 77821 78888 - GT4
CAZyme HRGMv2_2622_5 HRGMv2_2622_5_59 78881 79867 - GT2
CAZyme HRGMv2_2622_5 HRGMv2_2622_5_60 79854 81014 - GT4
TC HRGMv2_2622_5 HRGMv2_2622_5_61 81011 81724 - 9.B.18.1.3
Gene ID: HRGMv2_2622_5_55
Type: CAZyme
Location: 74779 - 75840 (-)
Gene ID: HRGMv2_2622_5_56
Type: pfam
Location: 75803 - 76387 (-)
Gene ID: HRGMv2_2622_5_57
Type: pfam
Location: 76508 - 77743 (-)
Gene ID: HRGMv2_2622_5_58
Type: CAZyme
Location: 77821 - 78888 (-)
Gene ID: HRGMv2_2622_5_59
Type: CAZyme
Location: 78881 - 79867 (-)
Gene ID: HRGMv2_2622_5_60
Type: CAZyme
Location: 79854 - 81014 (-)
Gene ID: HRGMv2_2622_5_61
Type: TC
Location: 81011 - 81724 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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