Cluster: HRGMv2_2622_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2622
- CGC Family ID: CGCFAM_00112
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2622_27 | HRGMv2_2622_27_10 | 9797 | 10756 | + | 3.A.1.1.10 |
| TC | HRGMv2_2622_27 | HRGMv2_2622_27_11 | 10772 | 11668 | + | 3.A.1.1.29 |
| TC | HRGMv2_2622_27 | HRGMv2_2622_27_12 | 11736 | 13229 | + | 3.A.1.1.9 |
| pfam | HRGMv2_2622_27 | HRGMv2_2622_27_13 | 13303 | 15972 | + | SLH | SLH |
| pfam | HRGMv2_2622_27 | HRGMv2_2622_27_14 | 15984 | 18785 | + | SLH | SLH | SLH |
| CAZyme | HRGMv2_2622_27 | HRGMv2_2622_27_15 | 18808 | 21987 | + | GH158 |
| CAZyme | HRGMv2_2622_27 | HRGMv2_2622_27_16 | 22045 | 24906 | + | GH158 |
Gene ID: HRGMv2_2622_27_10
Type: TC
Location: 9797 - 10756 (+)
Type: TC
Location: 9797 - 10756 (+)
Gene ID: HRGMv2_2622_27_11
Type: TC
Location: 10772 - 11668 (+)
Type: TC
Location: 10772 - 11668 (+)
Gene ID: HRGMv2_2622_27_12
Type: TC
Location: 11736 - 13229 (+)
Type: TC
Location: 11736 - 13229 (+)
Gene ID: HRGMv2_2622_27_13
Type: pfam
Location: 13303 - 15972 (+)
Type: pfam
Location: 13303 - 15972 (+)
Gene ID: HRGMv2_2622_27_14
Type: pfam
Location: 15984 - 18785 (+)
Type: pfam
Location: 15984 - 18785 (+)
Gene ID: HRGMv2_2622_27_15
Type: CAZyme
Location: 18808 - 21987 (+)
Type: CAZyme
Location: 18808 - 21987 (+)
Gene ID: HRGMv2_2622_27_16
Type: CAZyme
Location: 22045 - 24906 (+)
Type: CAZyme
Location: 22045 - 24906 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
UMGS1820
Species
UMGS1820 sp905201285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.