Cluster: HRGMv2_2622_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2622
- CGC Family ID: CGCFAM_05437
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2622_1 | HRGMv2_2622_1_34 | 33950 | 34831 | + | 3.A.1.4.10 |
| TC | HRGMv2_2622_1 | HRGMv2_2622_1_35 | 34842 | 35918 | + | 3.A.1.4.8 |
| TC | HRGMv2_2622_1 | HRGMv2_2622_1_36 | 35911 | 36750 | + | 3.A.1.4.10 |
| TC | HRGMv2_2622_1 | HRGMv2_2622_1_37 | 36750 | 37457 | + | 3.A.1.4.10 |
| pfam | HRGMv2_2622_1 | HRGMv2_2622_1_38 | 37471 | 38094 | + | tRNA_edit |
| CAZyme | HRGMv2_2622_1 | HRGMv2_2622_1_39 | 38369 | 39670 | - | GH10 |
Gene ID: HRGMv2_2622_1_34
Type: TC
Location: 33950 - 34831 (+)
Type: TC
Location: 33950 - 34831 (+)
Gene ID: HRGMv2_2622_1_35
Type: TC
Location: 34842 - 35918 (+)
Type: TC
Location: 34842 - 35918 (+)
Gene ID: HRGMv2_2622_1_36
Type: TC
Location: 35911 - 36750 (+)
Type: TC
Location: 35911 - 36750 (+)
Gene ID: HRGMv2_2622_1_37
Type: TC
Location: 36750 - 37457 (+)
Type: TC
Location: 36750 - 37457 (+)
Gene ID: HRGMv2_2622_1_38
Type: pfam
Location: 37471 - 38094 (+)
Type: pfam
Location: 37471 - 38094 (+)
Gene ID: HRGMv2_2622_1_39
Type: CAZyme
Location: 38369 - 39670 (-)
Type: CAZyme
Location: 38369 - 39670 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
UMGS1820
Species
UMGS1820 sp905201285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.