Cluster: HRGMv2_2621_CGC7
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2621
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2621_3 | HRGMv2_2621_3_52 | 54176 | 55816 | - | GH78 |
| TF | HRGMv2_2621_3 | HRGMv2_2621_3_53 | 55918 | 56247 | - | DUF24 |
| STP | HRGMv2_2621_3 | HRGMv2_2621_3_54 | 56543 | 57163 | + | Fer4 |
| TC | HRGMv2_2621_3 | HRGMv2_2621_3_55 | 57157 | 58695 | + | 3.A.1.12.8 |
| TC | HRGMv2_2621_3 | HRGMv2_2621_3_56 | 58708 | 59544 | + | 3.A.1.12.3 |
| pfam | HRGMv2_2621_3 | HRGMv2_2621_3_57 | 59531 | 60346 | + | Macro |
| NULL(UNKNOWN) | HRGMv2_2621_3 | HRGMv2_2621_3_58 | 60291 | 61139 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2621_3 | HRGMv2_2621_3_59 | 61337 | 64057 | + | GH106 |
| STP | HRGMv2_2621_3 | HRGMv2_2621_3_60 | 64450 | 66114 | + | SBP_bac_1 |
| TC | HRGMv2_2621_3 | HRGMv2_2621_3_61 | 66139 | 67098 | + | 3.A.1.1.10 |
| TC | HRGMv2_2621_3 | HRGMv2_2621_3_62 | 67111 | 68010 | + | 3.A.1.1.10 |
| NULL(UNKNOWN) | HRGMv2_2621_3 | HRGMv2_2621_3_63 | 68054 | 69820 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2621_3 | HRGMv2_2621_3_64 | 69946 | 77619 | + | SLH | SLH | SLH | Hepar_II_III_C | Hepar_II_III_N | aBig_2 | CBM96 |
| CAZyme | HRGMv2_2621_3 | HRGMv2_2621_3_65 | 77754 | 79109 | + | GH29 |
Gene ID: HRGMv2_2621_3_52
Type: CAZyme
Location: 54176 - 55816 (-)
Type: CAZyme
Location: 54176 - 55816 (-)
Gene ID: HRGMv2_2621_3_53
Type: TF
Location: 55918 - 56247 (-)
Type: TF
Location: 55918 - 56247 (-)
Gene ID: HRGMv2_2621_3_54
Type: STP
Location: 56543 - 57163 (+)
Type: STP
Location: 56543 - 57163 (+)
Gene ID: HRGMv2_2621_3_55
Type: TC
Location: 57157 - 58695 (+)
Type: TC
Location: 57157 - 58695 (+)
Gene ID: HRGMv2_2621_3_56
Type: TC
Location: 58708 - 59544 (+)
Type: TC
Location: 58708 - 59544 (+)
Gene ID: HRGMv2_2621_3_57
Type: pfam
Location: 59531 - 60346 (+)
Type: pfam
Location: 59531 - 60346 (+)
Gene ID: HRGMv2_2621_3_58
Type:
Location: 60291 - 61139 (+)
Type:
Location: 60291 - 61139 (+)
Gene ID: HRGMv2_2621_3_59
Type: CAZyme
Location: 61337 - 64057 (+)
Type: CAZyme
Location: 61337 - 64057 (+)
Gene ID: HRGMv2_2621_3_60
Type: STP
Location: 64450 - 66114 (+)
Type: STP
Location: 64450 - 66114 (+)
Gene ID: HRGMv2_2621_3_61
Type: TC
Location: 66139 - 67098 (+)
Type: TC
Location: 66139 - 67098 (+)
Gene ID: HRGMv2_2621_3_62
Type: TC
Location: 67111 - 68010 (+)
Type: TC
Location: 67111 - 68010 (+)
Gene ID: HRGMv2_2621_3_63
Type:
Location: 68054 - 69820 (+)
Type:
Location: 68054 - 69820 (+)
Gene ID: HRGMv2_2621_3_64
Type: pfam
Location: 69946 - 77619 (+)
Type: pfam
Location: 69946 - 77619 (+)
Gene ID: HRGMv2_2621_3_65
Type: CAZyme
Location: 77754 - 79109 (+)
Type: CAZyme
Location: 77754 - 79109 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Ructibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.