Cluster: HRGMv2_2621_CGC44
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2621
- CGC Family ID: CGCFAM_01314
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2621_67 | HRGMv2_2621_67_4 | 5840 | 6718 | - | 3.A.1.1.29 |
| TC | HRGMv2_2621_67 | HRGMv2_2621_67_5 | 6748 | 7713 | - | 3.A.1.1.10 |
| TC | HRGMv2_2621_67 | HRGMv2_2621_67_6 | 7919 | 9757 | - | 9.B.33.1.1 |
| TF | HRGMv2_2621_67 | HRGMv2_2621_67_7 | 9754 | 11370 | - | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_2621_67 | HRGMv2_2621_67_8 | 11720 | 12532 | - | RelA_SpoT |
| CAZyme | HRGMv2_2621_67 | HRGMv2_2621_67_9 | 12840 | 15437 | + | PL8_3 |
Gene ID: HRGMv2_2621_67_4
Type: TC
Location: 5840 - 6718 (-)
Type: TC
Location: 5840 - 6718 (-)
Gene ID: HRGMv2_2621_67_5
Type: TC
Location: 6748 - 7713 (-)
Type: TC
Location: 6748 - 7713 (-)
Gene ID: HRGMv2_2621_67_6
Type: TC
Location: 7919 - 9757 (-)
Type: TC
Location: 7919 - 9757 (-)
Gene ID: HRGMv2_2621_67_7
Type: TF
Location: 9754 - 11370 (-)
Type: TF
Location: 9754 - 11370 (-)
Gene ID: HRGMv2_2621_67_8
Type: pfam
Location: 11720 - 12532 (-)
Type: pfam
Location: 11720 - 12532 (-)
Gene ID: HRGMv2_2621_67_9
Type: CAZyme
Location: 12840 - 15437 (+)
Type: CAZyme
Location: 12840 - 15437 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Ructibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.