Cluster: HRGMv2_2621_CGC39
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2621
- CGC Family ID: CGCFAM_00058
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2621_55 | HRGMv2_2621_55_8 | 9443 | 10420 | + | 3.A.1.1.10 |
| TC | HRGMv2_2621_55 | HRGMv2_2621_55_9 | 10443 | 11324 | + | 3.A.1.1.10 |
| pfam | HRGMv2_2621_55 | HRGMv2_2621_55_10 | 11355 | 14618 | + | SLH | SLH | SLH | aBig_2 | aBig_2 | aBig_2 |
| pfam | HRGMv2_2621_55 | HRGMv2_2621_55_11 | 14618 | 17320 | + | SLH | SLH |
| CAZyme | HRGMv2_2621_55 | HRGMv2_2621_55_12 | 17342 | 21544 | + | CBM32 | PL35 |
| CAZyme | HRGMv2_2621_55 | HRGMv2_2621_55_13 | 21585 | 25556 | + | PL35 |
| CAZyme | HRGMv2_2621_55 | HRGMv2_2621_55_14 | 25602 | 27644 | + | CBM32 |
Gene ID: HRGMv2_2621_55_8
Type: TC
Location: 9443 - 10420 (+)
Type: TC
Location: 9443 - 10420 (+)
Gene ID: HRGMv2_2621_55_9
Type: TC
Location: 10443 - 11324 (+)
Type: TC
Location: 10443 - 11324 (+)
Gene ID: HRGMv2_2621_55_10
Type: pfam
Location: 11355 - 14618 (+)
Type: pfam
Location: 11355 - 14618 (+)
Gene ID: HRGMv2_2621_55_11
Type: pfam
Location: 14618 - 17320 (+)
Type: pfam
Location: 14618 - 17320 (+)
Gene ID: HRGMv2_2621_55_12
Type: CAZyme
Location: 17342 - 21544 (+)
Type: CAZyme
Location: 17342 - 21544 (+)
Gene ID: HRGMv2_2621_55_13
Type: CAZyme
Location: 21585 - 25556 (+)
Type: CAZyme
Location: 21585 - 25556 (+)
Gene ID: HRGMv2_2621_55_14
Type: CAZyme
Location: 25602 - 27644 (+)
Type: CAZyme
Location: 25602 - 27644 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Ructibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.