Cluster: HRGMv2_2621_CGC25
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2621
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2621_23 | HRGMv2_2621_23_11 | 10401 | 11372 | + | CE4 |
| pfam | HRGMv2_2621_23 | HRGMv2_2621_23_12 | 11461 | 12456 | + | AsnA |
| pfam | HRGMv2_2621_23 | HRGMv2_2621_23_13 | 12570 | 13097 | + | Isochorismatase |
| CAZyme | HRGMv2_2621_23 | HRGMv2_2621_23_14 | 13165 | 17178 | - | PL35 |
| TF | HRGMv2_2621_23 | HRGMv2_2621_23_15 | 17171 | 19486 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2621_23 | HRGMv2_2621_23_16 | 19585 | 20670 | - | GH105 |
| NULL(UNKNOWN) | HRGMv2_2621_23 | HRGMv2_2621_23_17 | 20770 | 23010 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2621_23 | HRGMv2_2621_23_18 | 23029 | 26547 | - | Polysacc_deac_1 |
| CAZyme | HRGMv2_2621_23 | HRGMv2_2621_23_19 | 26580 | 30659 | - | CE6 |
| CAZyme | HRGMv2_2621_23 | HRGMv2_2621_23_20 | 30652 | 35001 | - | PL35 |
| NULL(UNKNOWN) | HRGMv2_2621_23 | HRGMv2_2621_23_21 | 35016 | 37634 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2621_23 | HRGMv2_2621_23_22 | 37652 | 39298 | - | SLH | SLH | SLH |
| TC | HRGMv2_2621_23 | HRGMv2_2621_23_23 | 39316 | 40212 | - | 3.A.1.1.10 |
| TC | HRGMv2_2621_23 | HRGMv2_2621_23_24 | 40223 | 41191 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_2621_23_11
Type: CAZyme
Location: 10401 - 11372 (+)
Type: CAZyme
Location: 10401 - 11372 (+)
Gene ID: HRGMv2_2621_23_12
Type: pfam
Location: 11461 - 12456 (+)
Type: pfam
Location: 11461 - 12456 (+)
Gene ID: HRGMv2_2621_23_13
Type: pfam
Location: 12570 - 13097 (+)
Type: pfam
Location: 12570 - 13097 (+)
Gene ID: HRGMv2_2621_23_14
Type: CAZyme
Location: 13165 - 17178 (-)
Type: CAZyme
Location: 13165 - 17178 (-)
Gene ID: HRGMv2_2621_23_15
Type: TF
Location: 17171 - 19486 (-)
Type: TF
Location: 17171 - 19486 (-)
Gene ID: HRGMv2_2621_23_16
Type: CAZyme
Location: 19585 - 20670 (-)
Type: CAZyme
Location: 19585 - 20670 (-)
Gene ID: HRGMv2_2621_23_17
Type:
Location: 20770 - 23010 (-)
Type:
Location: 20770 - 23010 (-)
Gene ID: HRGMv2_2621_23_18
Type: pfam
Location: 23029 - 26547 (-)
Type: pfam
Location: 23029 - 26547 (-)
Gene ID: HRGMv2_2621_23_19
Type: CAZyme
Location: 26580 - 30659 (-)
Type: CAZyme
Location: 26580 - 30659 (-)
Gene ID: HRGMv2_2621_23_20
Type: CAZyme
Location: 30652 - 35001 (-)
Type: CAZyme
Location: 30652 - 35001 (-)
Gene ID: HRGMv2_2621_23_21
Type:
Location: 35016 - 37634 (-)
Type:
Location: 35016 - 37634 (-)
Gene ID: HRGMv2_2621_23_22
Type: pfam
Location: 37652 - 39298 (-)
Type: pfam
Location: 37652 - 39298 (-)
Gene ID: HRGMv2_2621_23_23
Type: TC
Location: 39316 - 40212 (-)
Type: TC
Location: 39316 - 40212 (-)
Gene ID: HRGMv2_2621_23_24
Type: TC
Location: 40223 - 41191 (-)
Type: TC
Location: 40223 - 41191 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Ructibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.