Cluster: HRGMv2_2621_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2621
- CGC Family ID: CGCFAM_00026
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2621_20 | HRGMv2_2621_20_30 | 32022 | 34502 | - | GH2 |
| STP | HRGMv2_2621_20 | HRGMv2_2621_20_31 | 34859 | 36124 | + | dCache_1 |
| pfam | HRGMv2_2621_20 | HRGMv2_2621_20_32 | 36143 | 36379 | + | Bac_rhamnosid_C |
| TC | HRGMv2_2621_20 | HRGMv2_2621_20_33 | 36777 | 37691 | + | 3.A.1.1.10 |
| TC | HRGMv2_2621_20 | HRGMv2_2621_20_34 | 37704 | 38597 | + | 3.A.1.1.29 |
| STP | HRGMv2_2621_20 | HRGMv2_2621_20_35 | 38628 | 40247 | + | SBP_bac_1 |
| TC | HRGMv2_2621_20 | HRGMv2_2621_20_36 | 40473 | 42200 | + | 9.B.33.1.1 |
Gene ID: HRGMv2_2621_20_30
Type: CAZyme
Location: 32022 - 34502 (-)
Type: CAZyme
Location: 32022 - 34502 (-)
Gene ID: HRGMv2_2621_20_31
Type: STP
Location: 34859 - 36124 (+)
Type: STP
Location: 34859 - 36124 (+)
Gene ID: HRGMv2_2621_20_32
Type: pfam
Location: 36143 - 36379 (+)
Type: pfam
Location: 36143 - 36379 (+)
Gene ID: HRGMv2_2621_20_33
Type: TC
Location: 36777 - 37691 (+)
Type: TC
Location: 36777 - 37691 (+)
Gene ID: HRGMv2_2621_20_34
Type: TC
Location: 37704 - 38597 (+)
Type: TC
Location: 37704 - 38597 (+)
Gene ID: HRGMv2_2621_20_35
Type: STP
Location: 38628 - 40247 (+)
Type: STP
Location: 38628 - 40247 (+)
Gene ID: HRGMv2_2621_20_36
Type: TC
Location: 40473 - 42200 (+)
Type: TC
Location: 40473 - 42200 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Ructibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.