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Cluster: HRGMv2_2621_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2621_16 HRGMv2_2621_16_1 3 4556 - CBM32
CAZyme HRGMv2_2621_16 HRGMv2_2621_16_2 4553 5962 - CBM32
pfam HRGMv2_2621_16 HRGMv2_2621_16_3 5975 8614 - SLH | SLH
TC HRGMv2_2621_16 HRGMv2_2621_16_4 8630 9514 - 3.A.1.1.10
TC HRGMv2_2621_16 HRGMv2_2621_16_5 9528 10505 - 3.A.1.1.10
TC HRGMv2_2621_16 HRGMv2_2621_16_6 10577 12226 - 3.A.1.1.10
TF HRGMv2_2621_16 HRGMv2_2621_16_7 12438 14666 - HTH_AraC | HTH_AraC
pfam HRGMv2_2621_16 HRGMv2_2621_16_8 15184 16164 + DAPDH_C
TC HRGMv2_2621_16 HRGMv2_2621_16_9 16310 17650 + 2.A.22.5.2
TC HRGMv2_2621_16 HRGMv2_2621_16_10 18212 19465 - 9.A.40.2.2
Gene ID: HRGMv2_2621_16_1
Type: CAZyme
Location: 3 - 4556 (-)
Gene ID: HRGMv2_2621_16_2
Type: CAZyme
Location: 4553 - 5962 (-)
Gene ID: HRGMv2_2621_16_3
Type: pfam
Location: 5975 - 8614 (-)
Gene ID: HRGMv2_2621_16_4
Type: TC
Location: 8630 - 9514 (-)
Gene ID: HRGMv2_2621_16_5
Type: TC
Location: 9528 - 10505 (-)
Gene ID: HRGMv2_2621_16_6
Type: TC
Location: 10577 - 12226 (-)
Gene ID: HRGMv2_2621_16_7
Type: TF
Location: 12438 - 14666 (-)
Gene ID: HRGMv2_2621_16_8
Type: pfam
Location: 15184 - 16164 (+)
Gene ID: HRGMv2_2621_16_9
Type: TC
Location: 16310 - 17650 (+)
Gene ID: HRGMv2_2621_16_10
Type: TC
Location: 18212 - 19465 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Monoglobales
→
Family
Monoglobaceae
→
Genus
Ructibacterium
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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