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Cluster: HRGMv2_2621_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2621_12 HRGMv2_2621_12_6 9082 10170 + 9.B.97.1.5
pfam HRGMv2_2621_12 HRGMv2_2621_12_7 10123 11310 - FAD_binding_2 | GIDA | HI0933_like | HI0933_like_1st
pfam HRGMv2_2621_12 HRGMv2_2621_12_8 11474 12814 - TRAM | tRNA_U5-meth_tr | Methyltransf_31
CAZyme HRGMv2_2621_12 HRGMv2_2621_12_9 12826 14835 - GH26
CAZyme HRGMv2_2621_12 HRGMv2_2621_12_10 14921 16858 - GH26
Gene ID: HRGMv2_2621_12_6
Type: TC
Location: 9082 - 10170 (+)
Gene ID: HRGMv2_2621_12_7
Type: pfam
Location: 10123 - 11310 (-)
Gene ID: HRGMv2_2621_12_8
Type: pfam
Location: 11474 - 12814 (-)
Gene ID: HRGMv2_2621_12_9
Type: CAZyme
Location: 12826 - 14835 (-)
Gene ID: HRGMv2_2621_12_10
Type: CAZyme
Location: 14921 - 16858 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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