Cluster: HRGMv2_2621_CGC16
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2621
- CGC Family ID: CGCFAM_00058
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2621_11 | HRGMv2_2621_11_15 | 13889 | 14455 | + | CBM50 |
| CAZyme | HRGMv2_2621_11 | HRGMv2_2621_11_16 | 14606 | 15529 | + | GH43 |
| STP | HRGMv2_2621_11 | HRGMv2_2621_11_17 | 15630 | 17189 | + | SBP_bac_1 |
| TC | HRGMv2_2621_11 | HRGMv2_2621_11_18 | 17232 | 18182 | + | 3.A.1.1.10 |
| TC | HRGMv2_2621_11 | HRGMv2_2621_11_19 | 18195 | 19124 | + | 3.A.1.1.10 |
| pfam | HRGMv2_2621_11 | HRGMv2_2621_11_20 | 19148 | 20833 | + | SLH | SLH | SLH |
| NULL(UNKNOWN) | HRGMv2_2621_11 | HRGMv2_2621_11_21 | 20830 | 23418 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2621_11 | HRGMv2_2621_11_22 | 23430 | 27797 | + | CBM32 | PL35 |
| NULL(UNKNOWN) | HRGMv2_2621_11 | HRGMv2_2621_11_23 | 27794 | 29077 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2621_11 | HRGMv2_2621_11_24 | 29092 | 33348 | + | CE20 |
| CAZyme | HRGMv2_2621_11 | HRGMv2_2621_11_25 | 33374 | 34477 | + | GH105 |
Gene ID: HRGMv2_2621_11_15
Type: CAZyme
Location: 13889 - 14455 (+)
Type: CAZyme
Location: 13889 - 14455 (+)
Gene ID: HRGMv2_2621_11_16
Type: CAZyme
Location: 14606 - 15529 (+)
Type: CAZyme
Location: 14606 - 15529 (+)
Gene ID: HRGMv2_2621_11_17
Type: STP
Location: 15630 - 17189 (+)
Type: STP
Location: 15630 - 17189 (+)
Gene ID: HRGMv2_2621_11_18
Type: TC
Location: 17232 - 18182 (+)
Type: TC
Location: 17232 - 18182 (+)
Gene ID: HRGMv2_2621_11_19
Type: TC
Location: 18195 - 19124 (+)
Type: TC
Location: 18195 - 19124 (+)
Gene ID: HRGMv2_2621_11_20
Type: pfam
Location: 19148 - 20833 (+)
Type: pfam
Location: 19148 - 20833 (+)
Gene ID: HRGMv2_2621_11_21
Type:
Location: 20830 - 23418 (+)
Type:
Location: 20830 - 23418 (+)
Gene ID: HRGMv2_2621_11_22
Type: CAZyme
Location: 23430 - 27797 (+)
Type: CAZyme
Location: 23430 - 27797 (+)
Gene ID: HRGMv2_2621_11_23
Type:
Location: 27794 - 29077 (+)
Type:
Location: 27794 - 29077 (+)
Gene ID: HRGMv2_2621_11_24
Type: CAZyme
Location: 29092 - 33348 (+)
Type: CAZyme
Location: 29092 - 33348 (+)
Gene ID: HRGMv2_2621_11_25
Type: CAZyme
Location: 33374 - 34477 (+)
Type: CAZyme
Location: 33374 - 34477 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Ructibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.