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Cluster: HRGMv2_2621_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2621_9 HRGMv2_2621_9_44 48403 49287 - 3.A.1.1.10
TC HRGMv2_2621_9 HRGMv2_2621_9_45 49307 50251 - 3.A.1.1.10
sulfatase HRGMv2_2621_9 HRGMv2_2621_9_46 50268 53882 - S1_8
CAZyme HRGMv2_2621_9 HRGMv2_2621_9_47 53902 56043 - GH99
CAZyme HRGMv2_2621_9 HRGMv2_2621_9_48 56293 58410 - GH31_3
Gene ID: HRGMv2_2621_9_44
Type: TC
Location: 48403 - 49287 (-)
Gene ID: HRGMv2_2621_9_45
Type: TC
Location: 49307 - 50251 (-)
Gene ID: HRGMv2_2621_9_46
Type: sulfatase
Location: 50268 - 53882 (-)
Gene ID: HRGMv2_2621_9_47
Type: CAZyme
Location: 53902 - 56043 (-)
Gene ID: HRGMv2_2621_9_48
Type: CAZyme
Location: 56293 - 58410 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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