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Cluster: HRGMv2_2620_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2620_13 HRGMv2_2620_13_25 28165 29262 + 9.B.160.1.10
TC HRGMv2_2620_13 HRGMv2_2620_13_26 29259 29960 + 9.B.143.2.3
pfam HRGMv2_2620_13 HRGMv2_2620_13_27 30042 31073 + DUF1385
pfam HRGMv2_2620_13 HRGMv2_2620_13_28 31096 31953 + PCMT | UPF0020 | Cons_hypoth95 | MTS | PrmA | Methyltransf_11 | Methyltransf_12 | Methyltransf_15 | Methyltransf_16 | Methyltransf_25 | Methyltransf_31 | PrmC_N
CAZyme HRGMv2_2620_13 HRGMv2_2620_13_29 32387 33277 - CE4
Gene ID: HRGMv2_2620_13_25
Type: TC
Location: 28165 - 29262 (+)
Gene ID: HRGMv2_2620_13_26
Type: TC
Location: 29259 - 29960 (+)
Gene ID: HRGMv2_2620_13_27
Type: pfam
Location: 30042 - 31073 (+)
Gene ID: HRGMv2_2620_13_28
Type: pfam
Location: 31096 - 31953 (+)
Gene ID: HRGMv2_2620_13_29
Type: CAZyme
Location: 32387 - 33277 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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