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Cluster: HRGMv2_2620_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2620_5 HRGMv2_2620_5_74 80505 84524 + GH146
TF HRGMv2_2620_5 HRGMv2_2620_5_75 84972 86360 - GntR
TC HRGMv2_2620_5 HRGMv2_2620_5_76 86446 87273 - 3.A.1.3.27
TC HRGMv2_2620_5 HRGMv2_2620_5_77 87310 88038 - 3.A.1.3.25
TC HRGMv2_2620_5 HRGMv2_2620_5_78 88075 88761 - 3.A.1.3.15
CAZyme HRGMv2_2620_5 HRGMv2_2620_5_79 89082 95603 + CE12 | CE8
NULL(UNKNOWN) HRGMv2_2620_5 HRGMv2_2620_5_80 95815 96060 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2620_5 HRGMv2_2620_5_81 96157 96591 - SCP2
TC HRGMv2_2620_5 HRGMv2_2620_5_82 96744 98630 - 9.A.8.1.5
Gene ID: HRGMv2_2620_5_74
Type: CAZyme
Location: 80505 - 84524 (+)
Gene ID: HRGMv2_2620_5_75
Type: TF
Location: 84972 - 86360 (-)
Gene ID: HRGMv2_2620_5_76
Type: TC
Location: 86446 - 87273 (-)
Gene ID: HRGMv2_2620_5_77
Type: TC
Location: 87310 - 88038 (-)
Gene ID: HRGMv2_2620_5_78
Type: TC
Location: 88075 - 88761 (-)
Gene ID: HRGMv2_2620_5_79
Type: CAZyme
Location: 89082 - 95603 (+)
Gene ID: HRGMv2_2620_5_80
Type:
Location: 95815 - 96060 (+)
Gene ID: HRGMv2_2620_5_81
Type: pfam
Location: 96157 - 96591 (-)
Gene ID: HRGMv2_2620_5_82
Type: TC
Location: 96744 - 98630 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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