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Cluster: HRGMv2_2620_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2620_5 HRGMv2_2620_5_27 30792 33170 + CE20
TC HRGMv2_2620_5 HRGMv2_2620_5_28 33383 34729 + 3.D.6.1.2
TC HRGMv2_2620_5 HRGMv2_2620_5_29 34757 35749 + 3.D.6.1.2
TC HRGMv2_2620_5 HRGMv2_2620_5_30 35749 36543 + 3.D.6.1.2
TC HRGMv2_2620_5 HRGMv2_2620_5_31 36543 37178 + 3.D.6.1.2
TC HRGMv2_2620_5 HRGMv2_2620_5_32 37179 37772 + 3.D.6.1.2
TC HRGMv2_2620_5 HRGMv2_2620_5_33 37787 38743 + 3.D.6.1.2
Gene ID: HRGMv2_2620_5_27
Type: CAZyme
Location: 30792 - 33170 (+)
Gene ID: HRGMv2_2620_5_28
Type: TC
Location: 33383 - 34729 (+)
Gene ID: HRGMv2_2620_5_29
Type: TC
Location: 34757 - 35749 (+)
Gene ID: HRGMv2_2620_5_30
Type: TC
Location: 35749 - 36543 (+)
Gene ID: HRGMv2_2620_5_31
Type: TC
Location: 36543 - 37178 (+)
Gene ID: HRGMv2_2620_5_32
Type: TC
Location: 37179 - 37772 (+)
Gene ID: HRGMv2_2620_5_33
Type: TC
Location: 37787 - 38743 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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