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Cluster: HRGMv2_2616_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2616_8 HRGMv2_2616_8_72 78190 79257 - 3.D.6.1.2
TC HRGMv2_2616_8 HRGMv2_2616_8_73 79272 79865 - 3.D.6.1.2
TC HRGMv2_2616_8 HRGMv2_2616_8_74 79867 80514 - 3.D.6.1.2
TC HRGMv2_2616_8 HRGMv2_2616_8_75 80511 81275 - 3.D.6.1.2
TC HRGMv2_2616_8 HRGMv2_2616_8_76 81275 82267 - 3.D.6.1.2
TC HRGMv2_2616_8 HRGMv2_2616_8_77 82285 83613 - 3.D.6.1.2
CAZyme HRGMv2_2616_8 HRGMv2_2616_8_78 83957 86350 - CE20
CAZyme HRGMv2_2616_8 HRGMv2_2616_8_79 86517 87998 - GH77
Gene ID: HRGMv2_2616_8_72
Type: TC
Location: 78190 - 79257 (-)
Gene ID: HRGMv2_2616_8_73
Type: TC
Location: 79272 - 79865 (-)
Gene ID: HRGMv2_2616_8_74
Type: TC
Location: 79867 - 80514 (-)
Gene ID: HRGMv2_2616_8_75
Type: TC
Location: 80511 - 81275 (-)
Gene ID: HRGMv2_2616_8_76
Type: TC
Location: 81275 - 82267 (-)
Gene ID: HRGMv2_2616_8_77
Type: TC
Location: 82285 - 83613 (-)
Gene ID: HRGMv2_2616_8_78
Type: CAZyme
Location: 83957 - 86350 (-)
Gene ID: HRGMv2_2616_8_79
Type: CAZyme
Location: 86517 - 87998 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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