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Cluster: HRGMv2_2616_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2616_6 HRGMv2_2616_6_7 5971 6468 - 3.A.7.19.1
pfam HRGMv2_2616_6 HRGMv2_2616_6_8 6471 6770 - Ribosomal_S6
TC HRGMv2_2616_6 HRGMv2_2616_6_9 7046 7702 + 2.A.115.2.14
CAZyme HRGMv2_2616_6 HRGMv2_2616_6_10 7949 11233 + CE12
pfam HRGMv2_2616_6 HRGMv2_2616_6_11 11426 11926 - Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10
pfam HRGMv2_2616_6 HRGMv2_2616_6_12 11942 12541 - Toprim | RecR_ZnF | Toprim_4 | RecR_C | RecR_HhH
TC HRGMv2_2616_6 HRGMv2_2616_6_13 12568 14760 - 3.A.7.16.1
pfam HRGMv2_2616_6 HRGMv2_2616_6_14 14957 15979 + Phage_integrase | Phage_int_SAM_1
TC HRGMv2_2616_6 HRGMv2_2616_6_15 15982 17928 - 3.A.1.121.4
Gene ID: HRGMv2_2616_6_7
Type: TC
Location: 5971 - 6468 (-)
Gene ID: HRGMv2_2616_6_8
Type: pfam
Location: 6471 - 6770 (-)
Gene ID: HRGMv2_2616_6_9
Type: TC
Location: 7046 - 7702 (+)
Gene ID: HRGMv2_2616_6_10
Type: CAZyme
Location: 7949 - 11233 (+)
Gene ID: HRGMv2_2616_6_11
Type: pfam
Location: 11426 - 11926 (-)
Gene ID: HRGMv2_2616_6_12
Type: pfam
Location: 11942 - 12541 (-)
Gene ID: HRGMv2_2616_6_13
Type: TC
Location: 12568 - 14760 (-)
Gene ID: HRGMv2_2616_6_14
Type: pfam
Location: 14957 - 15979 (+)
Gene ID: HRGMv2_2616_6_15
Type: TC
Location: 15982 - 17928 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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