Cluster: HRGMv2_2616_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2616
- CGC Family ID: CGCFAM_03863
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2616_4 | HRGMv2_2616_4_9 | 12418 | 13524 | + | 9.B.160.1.10 |
| TC | HRGMv2_2616_4 | HRGMv2_2616_4_10 | 13530 | 14246 | + | 9.B.143.2.3 |
| pfam | HRGMv2_2616_4 | HRGMv2_2616_4_11 | 14335 | 15444 | + | DUF1385 |
| pfam | HRGMv2_2616_4 | HRGMv2_2616_4_12 | 15480 | 16328 | + | PCMT | UPF0020 | Cons_hypoth95 | MTS | Methyltransf_10 | PrmA | Eco57I | Methyltransf_11 | Methyltransf_12 | Methyltransf_16 | Methyltransf_25 | Methyltransf_31 | PrmC_N |
| CAZyme | HRGMv2_2616_4 | HRGMv2_2616_4_13 | 17048 | 17953 | - | CE4 |
Gene ID: HRGMv2_2616_4_9
Type: TC
Location: 12418 - 13524 (+)
Type: TC
Location: 12418 - 13524 (+)
Gene ID: HRGMv2_2616_4_10
Type: TC
Location: 13530 - 14246 (+)
Type: TC
Location: 13530 - 14246 (+)
Gene ID: HRGMv2_2616_4_11
Type: pfam
Location: 14335 - 15444 (+)
Type: pfam
Location: 14335 - 15444 (+)
Gene ID: HRGMv2_2616_4_12
Type: pfam
Location: 15480 - 16328 (+)
Type: pfam
Location: 15480 - 16328 (+)
Gene ID: HRGMv2_2616_4_13
Type: CAZyme
Location: 17048 - 17953 (-)
Type: CAZyme
Location: 17048 - 17953 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
Monoglobus
Species
Monoglobus pectinilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.