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Cluster: HRGMv2_2616_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2616_24 HRGMv2_2616_24_204 238910 239557 - 2.A.87.1.3
pfam HRGMv2_2616_24 HRGMv2_2616_24_205 239879 241690 - VanW
STP HRGMv2_2616_24 HRGMv2_2616_24_206 241826 243016 - AAA
CAZyme HRGMv2_2616_24 HRGMv2_2616_24_207 243183 245471 - GT4
pfam HRGMv2_2616_24 HRGMv2_2616_24_208 245704 247131 + Cu_amine_oxidN1 | DHHW
sulfatase HRGMv2_2616_24 HRGMv2_2616_24_209 247137 248696 + S1_20
CAZyme HRGMv2_2616_24 HRGMv2_2616_24_210 248770 252258 + GT39
Gene ID: HRGMv2_2616_24_204
Type: TC
Location: 238910 - 239557 (-)
Gene ID: HRGMv2_2616_24_205
Type: pfam
Location: 239879 - 241690 (-)
Gene ID: HRGMv2_2616_24_206
Type: STP
Location: 241826 - 243016 (-)
Gene ID: HRGMv2_2616_24_207
Type: CAZyme
Location: 243183 - 245471 (-)
Gene ID: HRGMv2_2616_24_208
Type: pfam
Location: 245704 - 247131 (+)
Gene ID: HRGMv2_2616_24_209
Type: sulfatase
Location: 247137 - 248696 (+)
Gene ID: HRGMv2_2616_24_210
Type: CAZyme
Location: 248770 - 252258 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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