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Cluster: HRGMv2_2616_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2616_3 HRGMv2_2616_3_171 199133 200566 - GT5
pfam HRGMv2_2616_3 HRGMv2_2616_3_172 200638 201771 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2616_3 HRGMv2_2616_3_173 201821 203038 - NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme HRGMv2_2616_3 HRGMv2_2616_3_174 203097 205157 - CBM48 | GH13_9
CAZyme HRGMv2_2616_3 HRGMv2_2616_3_175 205539 206519 - GT2
CAZyme HRGMv2_2616_3 HRGMv2_2616_3_176 206482 207543 - GT2
TC HRGMv2_2616_3 HRGMv2_2616_3_177 207548 208732 - 3.A.1.103.6
Gene ID: HRGMv2_2616_3_171
Type: CAZyme
Location: 199133 - 200566 (-)
Gene ID: HRGMv2_2616_3_172
Type: pfam
Location: 200638 - 201771 (-)
Gene ID: HRGMv2_2616_3_173
Type: pfam
Location: 201821 - 203038 (-)
Gene ID: HRGMv2_2616_3_174
Type: CAZyme
Location: 203097 - 205157 (-)
Gene ID: HRGMv2_2616_3_175
Type: CAZyme
Location: 205539 - 206519 (-)
Gene ID: HRGMv2_2616_3_176
Type: CAZyme
Location: 206482 - 207543 (-)
Gene ID: HRGMv2_2616_3_177
Type: TC
Location: 207548 - 208732 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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