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Cluster: HRGMv2_2616_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2616_19 HRGMv2_2616_19_8 14148 16754 - 2.A.21.9.1
TF HRGMv2_2616_19 HRGMv2_2616_19_9 17201 17995 - HTH_AraC
TF HRGMv2_2616_19 HRGMv2_2616_19_10 18032 18847 - HTH_AraC
CAZyme HRGMv2_2616_19 HRGMv2_2616_19_11 19093 22467 + GH5_4
Gene ID: HRGMv2_2616_19_8
Type: TC
Location: 14148 - 16754 (-)
Gene ID: HRGMv2_2616_19_9
Type: TF
Location: 17201 - 17995 (-)
Gene ID: HRGMv2_2616_19_10
Type: TF
Location: 18032 - 18847 (-)
Gene ID: HRGMv2_2616_19_11
Type: CAZyme
Location: 19093 - 22467 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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