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Cluster: HRGMv2_2616_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2616_12 HRGMv2_2616_12_71 120637 121335 + 9.B.18.1.2
pfam HRGMv2_2616_12 HRGMv2_2616_12_72 121363 122532 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam HRGMv2_2616_12 HRGMv2_2616_12_73 122552 122899 + Hpt
TC HRGMv2_2616_12 HRGMv2_2616_12_74 122930 124465 + 8.A.59.4.1
TC HRGMv2_2616_12 HRGMv2_2616_12_75 124575 126185 + 2.A.66.1.40
CAZyme HRGMv2_2616_12 HRGMv2_2616_12_76 126203 127336 + GT4
CAZyme HRGMv2_2616_12 HRGMv2_2616_12_77 127363 128580 + GT4
Gene ID: HRGMv2_2616_12_71
Type: TC
Location: 120637 - 121335 (+)
Gene ID: HRGMv2_2616_12_72
Type: pfam
Location: 121363 - 122532 (+)
Gene ID: HRGMv2_2616_12_73
Type: pfam
Location: 122552 - 122899 (+)
Gene ID: HRGMv2_2616_12_74
Type: TC
Location: 122930 - 124465 (+)
Gene ID: HRGMv2_2616_12_75
Type: TC
Location: 124575 - 126185 (+)
Gene ID: HRGMv2_2616_12_76
Type: CAZyme
Location: 126203 - 127336 (+)
Gene ID: HRGMv2_2616_12_77
Type: CAZyme
Location: 127363 - 128580 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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