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Cluster: HRGMv2_2616_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2616_9 HRGMv2_2616_9_21 26885 29899 - 3.A.12.1.1
pfam HRGMv2_2616_9 HRGMv2_2616_9_22 30206 30940 - DUF5131
pfam HRGMv2_2616_9 HRGMv2_2616_9_23 30937 31665 - SIR2
TC HRGMv2_2616_9 HRGMv2_2616_9_24 32585 33250 + 3.D.1.8.1
STP HRGMv2_2616_9 HRGMv2_2616_9_25 33378 33842 - NUDIX
CAZyme HRGMv2_2616_9 HRGMv2_2616_9_26 33891 35426 - CBM91 | GH43_12
Gene ID: HRGMv2_2616_9_21
Type: TC
Location: 26885 - 29899 (-)
Gene ID: HRGMv2_2616_9_22
Type: pfam
Location: 30206 - 30940 (-)
Gene ID: HRGMv2_2616_9_23
Type: pfam
Location: 30937 - 31665 (-)
Gene ID: HRGMv2_2616_9_24
Type: TC
Location: 32585 - 33250 (+)
Gene ID: HRGMv2_2616_9_25
Type: STP
Location: 33378 - 33842 (-)
Gene ID: HRGMv2_2616_9_26
Type: CAZyme
Location: 33891 - 35426 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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