Cluster: HRGMv2_2615_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2615
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2615_15 | HRGMv2_2615_15_21 | 24762 | 25586 | + | 3.A.1.3.27 |
| TC | HRGMv2_2615_15 | HRGMv2_2615_15_22 | 25684 | 26361 | + | 3.A.1.3.15 |
| pfam | HRGMv2_2615_15 | HRGMv2_2615_15_23 | 26483 | 26971 | + | dCMP_cyt_deam_1 | MafB19-deam |
| CAZyme | HRGMv2_2615_15 | HRGMv2_2615_15_24 | 27093 | 29273 | + | CBM67 | GH78 |
Gene ID: HRGMv2_2615_15_21
Type: TC
Location: 24762 - 25586 (+)
Type: TC
Location: 24762 - 25586 (+)
Gene ID: HRGMv2_2615_15_22
Type: TC
Location: 25684 - 26361 (+)
Type: TC
Location: 25684 - 26361 (+)
Gene ID: HRGMv2_2615_15_23
Type: pfam
Location: 26483 - 26971 (+)
Type: pfam
Location: 26483 - 26971 (+)
Gene ID: HRGMv2_2615_15_24
Type: CAZyme
Location: 27093 - 29273 (+)
Type: CAZyme
Location: 27093 - 29273 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp900550065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.