Cluster: HRGMv2_2615_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2615
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2615_6 | HRGMv2_2615_6_5 | 4380 | 5741 | - | GH30_1 |
| TF | HRGMv2_2615_6 | HRGMv2_2615_6_6 | 5917 | 6360 | + | FUR |
| TC | HRGMv2_2615_6 | HRGMv2_2615_6_7 | 6366 | 7313 | + | 3.A.1.15.3 |
| TC | HRGMv2_2615_6 | HRGMv2_2615_6_8 | 7313 | 8014 | + | 3.A.1.15.1 |
| TC | HRGMv2_2615_6 | HRGMv2_2615_6_9 | 8046 | 8864 | + | 3.A.1.15.6 |
Gene ID: HRGMv2_2615_6_5
Type: CAZyme
Location: 4380 - 5741 (-)
Type: CAZyme
Location: 4380 - 5741 (-)
Gene ID: HRGMv2_2615_6_6
Type: TF
Location: 5917 - 6360 (+)
Type: TF
Location: 5917 - 6360 (+)
Gene ID: HRGMv2_2615_6_7
Type: TC
Location: 6366 - 7313 (+)
Type: TC
Location: 6366 - 7313 (+)
Gene ID: HRGMv2_2615_6_8
Type: TC
Location: 7313 - 8014 (+)
Type: TC
Location: 7313 - 8014 (+)
Gene ID: HRGMv2_2615_6_9
Type: TC
Location: 8046 - 8864 (+)
Type: TC
Location: 8046 - 8864 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp900550065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.