Cluster: HRGMv2_2615_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2615
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2615_5 | HRGMv2_2615_5_48 | 50784 | 54890 | + | CBM32 | PL21 |
| peptidase | HRGMv2_2615_5 | HRGMv2_2615_5_49 | 55179 | 56840 | + | S15.UNW |
| pfam | HRGMv2_2615_5 | HRGMv2_2615_5_50 | 57131 | 58216 | + | HTH_30 | GGDEF_2 |
| TC | HRGMv2_2615_5 | HRGMv2_2615_5_51 | 58261 | 58950 | + | 3.A.1.140.1 |
Gene ID: HRGMv2_2615_5_48
Type: CAZyme
Location: 50784 - 54890 (+)
Type: CAZyme
Location: 50784 - 54890 (+)
Gene ID: HRGMv2_2615_5_49
Type: peptidase
Location: 55179 - 56840 (+)
Type: peptidase
Location: 55179 - 56840 (+)
Gene ID: HRGMv2_2615_5_50
Type: pfam
Location: 57131 - 58216 (+)
Type: pfam
Location: 57131 - 58216 (+)
Gene ID: HRGMv2_2615_5_51
Type: TC
Location: 58261 - 58950 (+)
Type: TC
Location: 58261 - 58950 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp900550065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.