Cluster: HRGMv2_2615_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2615
- CGC Family ID: CGCFAM_10119
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2615_81 | HRGMv2_2615_81_2 | 170 | 2785 | - | 3.A.3.2.21 |
| STP | HRGMv2_2615_81 | HRGMv2_2615_81_3 | 3051 | 3596 | + | TetR_N |
| NULL(UNKNOWN) | HRGMv2_2615_81 | HRGMv2_2615_81_4 | 3623 | 4657 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2615_81 | HRGMv2_2615_81_5 | 4908 | 6620 | - | PL33_2 |
| TC | HRGMv2_2615_81 | HRGMv2_2615_81_6 | 6871 | 8544 | + | 3.A.1.112.9 |
| TC | HRGMv2_2615_81 | HRGMv2_2615_81_7 | 8541 | 10160 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_2615_81_2
Type: TC
Location: 170 - 2785 (-)
Type: TC
Location: 170 - 2785 (-)
Gene ID: HRGMv2_2615_81_3
Type: STP
Location: 3051 - 3596 (+)
Type: STP
Location: 3051 - 3596 (+)
Gene ID: HRGMv2_2615_81_4
Type:
Location: 3623 - 4657 (-)
Type:
Location: 3623 - 4657 (-)
Gene ID: HRGMv2_2615_81_5
Type: CAZyme
Location: 4908 - 6620 (-)
Type: CAZyme
Location: 4908 - 6620 (-)
Gene ID: HRGMv2_2615_81_6
Type: TC
Location: 6871 - 8544 (+)
Type: TC
Location: 6871 - 8544 (+)
Gene ID: HRGMv2_2615_81_7
Type: TC
Location: 8541 - 10160 (+)
Type: TC
Location: 8541 - 10160 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp900550065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.