Cluster: HRGMv2_2615_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2615
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2615_80 | HRGMv2_2615_80_7 | 4871 | 5890 | - | GH179 |
| CAZyme | HRGMv2_2615_80 | HRGMv2_2615_80_8 | 5922 | 7445 | - | GH31_19 |
| pfam | HRGMv2_2615_80 | HRGMv2_2615_80_9 | 7506 | 8471 | - | AP_endonuc_2 |
| pfam | HRGMv2_2615_80 | HRGMv2_2615_80_10 | 8630 | 9775 | - | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| TC | HRGMv2_2615_80 | HRGMv2_2615_80_11 | 10069 | 10614 | - | 1.A.33.1.4 |
Gene ID: HRGMv2_2615_80_7
Type: CAZyme
Location: 4871 - 5890 (-)
Type: CAZyme
Location: 4871 - 5890 (-)
Gene ID: HRGMv2_2615_80_8
Type: CAZyme
Location: 5922 - 7445 (-)
Type: CAZyme
Location: 5922 - 7445 (-)
Gene ID: HRGMv2_2615_80_9
Type: pfam
Location: 7506 - 8471 (-)
Type: pfam
Location: 7506 - 8471 (-)
Gene ID: HRGMv2_2615_80_10
Type: pfam
Location: 8630 - 9775 (-)
Type: pfam
Location: 8630 - 9775 (-)
Gene ID: HRGMv2_2615_80_11
Type: TC
Location: 10069 - 10614 (-)
Type: TC
Location: 10069 - 10614 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UMGS1253
Genus
Aphodoplasma
Species
Aphodoplasma sp900550065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.